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zarmeen saeed

University of Engineering and Technology Lahore • Lahore • Pakistan

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • English
Programming languages
  • C++

Fields of interest

WGS analysis
Jointly analyzes two traits using de novo exome sequencing data. mTADA scans de…
Assists users in searching somatic copy number alterations in whole genome…
Automates the determination of the pathogenicity of germline variants. CharGer…
De novo sequencing analysis
Serves for cancer-related gene prioritization. MGOGP is an algorithm that can…
Allows users to compare genomic structures and annotations across multiple…
Assists users in optimized block trimming. This algorithm is a polynomial-time…
Metagenomic sequencing analysis
Permits users to index references and classify short reads for environmental…
Integrates multi-omics profiles for phenotype prediction. iOmicsPASS utilizes…
Determines and ranks low coverage and highly divergent viruses into metagenomic…