Unlock your biological data

Shaojun Xie's avatar image
Shaojun Xie - Bioinformatician
Open to new opportunities
Shaojun Xie's avatar image
Upload a photo
Open to new opportunities

Shaojun Xie

Purdue University System • Purdue University • West Lafayette • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • BS-seq analysis
  • aCGH data analysis
  • Chinese
  • English
Programming languages
  • Perl
  • Python
  • R

Reviews and Discussions


Bismark 2016-11-09, 15:32:55
Bismark is a great tool for the alignment of BS-seq reads.


No discussions...

Fields of interest

WGS analysis
Deduces relative copy number (RCN) alterations at each locus from FAST-SeqS…
Refines regulatory motifs. LMMO consists of a large-margin-type algorithm that…
Classifies protein sequence and identifies remote protein homology via…
BS-seq analysis
Serves for inter-sample and differential methylation analysis of whole genome…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Combines structural variation (SV) calls from different algorithms to reduce…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Consists of a Bayesian, unsupervised, integrative clustering model for…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…