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zifeng cui

Sun Yat-sen University • Guangzhou • China

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • De novo sequencing analysis
  • Chinese
Programming languages
  • Javascript
  • Python
  • R

Fields of interest

Genome edition
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Creates and picks single-guide RNAs (sgRNAs) or template sequences for knockout…
WGS analysis
Evaluates gene-phenotype associations from large and mixed cohorts of patients.…
Tests if index switching is occurring in a given dataset. Index_investigator is…
Leverages adjacent normal tissue from tumor biopsies. LumosVar has seven steps:…
De novo sequencing analysis
Predicts AsCpf1 (Cpf1 from Acidaminococcus sp. BV3L6) activity based on target…
Enables hierarchical multi-step assembly of large DNA fragments. MetClo uses…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…