ProGMap specifications


Unique identifier OMICS_05356
Name ProGMap
Alternative name Protein Group Mappings
Restrictions to use None
Maintained No

Publication for Protein Group Mappings

ProGMap citation


Open source tool for prediction of genome wide protein protein interaction network based on ortholog information

Source Code Biol Med
PMCID: 2924336
PMID: 20684769
DOI: 10.1186/1751-0473-5-8

[…] all-versus-all BLASTP analysis (Washington University,, followed by some form of clustering (Jaccard clustering, bidirectional best hit clustering; []). Some tools, including ProGMap [], Berkeley PHOG [], TdrTargets [], BLASTO [], use additional, complementing sequence and structural information to identify orthologs across multiple organisms. Several ortholog databases ha […]

ProGMap institution(s)
Laboratory of Bioinformatics, Wageningen University and Research Centre (WUR), HA Wageningen, Netherlands

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