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Projector specifications

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Unique identifier OMICS_11250
Name Projector
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Irmtraud Meyer

Publication for Projector

Projector citations

 (2)
library_books

Reranking candidate gene models with cross species comparison for improved gene prediction

2008
BMC Bioinformatics
PMCID: 2587481
PMID: 18854050
DOI: 10.1186/1471-2105-9-433

[…] species, capturing phylogenetic footprints, as coding sequences tend to be relatively highly conserved. reference-based gene finders such as dps [], rosetta [], procrustes [], genomescan [], projector [], genewise [], genemapper [] and exonhunter [] have sought to predict genes in target species through alignment with genes or proteins from reference species, modeling substitution […]

library_books

A space efficient and accurate method for mapping and aligning cDNA sequences onto genomic sequence

2008
Nucleic Acids Res
PMCID: 2377433
PMID: 18344523
DOI: 10.1093/nar/gkn105

[…] 36) and mouse (build 35) genomic sequences and the human unigene (build #203) sequence were downloaded from ncbi (ftp://ftp.ncbi.nih.gov/). we used cdna sequences and annotations provided by the projector web site (http://www.sanger.ac.uk/software/analysis/projector) as test samples. after removal of duplications and correction for trivial errors, the data set contains 491 homologous pairs […]


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Projector institution(s)
Oxford Centre for Gene Function, Oxford, UK

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