pRoloc specifications

Information


Unique identifier OMICS_18347
Name pRoloc
Software type Package/Module, Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.20.1
Stability Stable
Requirements
AnnotationDbi, methods, stats, plyr, RColorBrewer, graphics, BiocGenerics, Biobase, utils, testthat, grDevices, lattice, dplyr, ggplot2, BiocParallel, R(>=2.15), biomaRt, scales, gtools, rmarkdown, knitr, MASS, mvtnorm, GO.db, xtable, class, nnet, e1071, rgl, hexbin, BiocStyle(>=2.5.19), randomforest, caret, roxygen2, proxy, dendextend, kernlab, FNN, MSnbase(>=1.19.20), MLInterfaces(>=1.37.1), Rcpp(>=0.10.3), mclust(>=4.3), sampling, pRolocdata(>=1.9.4), synapter, hpar(>=1.15.3), Rtsne(>=0.13), nipals
Maintained Yes

Subtool


  • QSep

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Versioning


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Documentation


Maintainers


  • person_outline Laurent Gatto <>
  • person_outline Oliver Crook <>

Additional information


http://bioconductor.org/packages/release/bioc/vignettes/pRoloc/inst/doc/pRoloc-tutorial.pdf

Publications for pRoloc

pRoloc institution(s)
Computational Proteomics Unit, Department of Biochemistry, University of Cambridge, Cambridge, UK; Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, UK; MRC Biostatistics Unit, Cambridge Institute for Public Health, Cambridge, UK
pRoloc funding source(s)
Supported by the BBSRC Strategic Longer and Larger grant (Award BB/L002817/1) and the Wellcome Trust Senior Investigator Award 110170/Z/15/Z awarded, the MRC (project reference MC UP 0801/1), a Wellcome Trust Technology Development Grant (Grant number 108467/Z/15/Z), a Wellcome Trust Mathematical Genomics and Medicine student supported financially by the School of Clinical Medicine, University of Cambridge.

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