PromoterSweep statistics

info info

Citations per year

info

Popular tool citations

chevron_left Transcription factor binding site prediction chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

PromoterSweep specifications

Information


Unique identifier OMICS_13963
Name PromoterSweep
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data Nucleotide sequences containing a potential promoter
Input format TXT
Output data A results page with general information about the sequence, best genomic mapping, promoter database search results, graphical overview, tables for combined TFBSs
Output format XML, HTML
Database management system MySQL
Computer skills Basic
Version 1.0
Stability No
Maintained No

Documentation


Maintainer


This tool is not available anymore.

Publication for PromoterSweep

PromoterSweep citation

library_books

Estrogen Receptor Alpha and Nuclear Factor Y Coordinately Regulate the Transcription of the SUMO Conjugating UBC9 Gene in MCF 7 Breast Cancer Cells

2013
PLoS One
PMCID: 3785449
PMID: 24086615
DOI: 10.1371/journal.pone.0075695

[…] the transcription start site refers to the ensemble transcript id enst00000325437. the putative proximal promoter and its putative transcription factor binding sites were predicted using the webtool promotersweep []., a ubc9 promoter-driven luciferase reporter construct was generated by inserting a 2,516 bp fragment containing the 5´-flanking region of the ubc9 gene from nucleotide positions […]


Want to access the full list of citations?
PromoterSweep institution(s)
Molecular Biophysics, German Cancer Research Center (DKFZ), Heidelberg, Germany; Computer Science and Artificial Intelligence, Informatics Faculty, University of Granada, Granada, Spain; Agricultural Biotechnology Center, Gödöllő, Hungary; Apoptosis and Genomics Research Group of the Hungarian Academy of Sciences, Research Center for Molecular Medicine, Medical and Health Science Center, University of Debrecen, Debrecen, Hungary

PromoterSweep reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review PromoterSweep