Promzea statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

Promzea specifications


Unique identifier OMICS_08100
Name Promzea
Interface Web user interface
Restrictions to use None
Input format cDNA FASTA, BED, gene ID, microarray ID
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained No


  • Plants and Fungi
    • Arabidopsis thaliana
    • Oryza sativa
    • Zea mays


This tool is not available anymore.

Publication for Promzea

Promzea in publications

PMCID: 4163388
PMID: 25250331
DOI: 10.1155/2014/708364

[…] same score on a random sequence set []. an element is considered to be significantly overrepresented if the p value is less than 0.01. additional analysis for unknown novel motifs was conducted by promzea ( []. 1000 bp long promoter regions were analyzed and each predicted motif was provided with a mean normalized conditional probability (mncp); a mncp score greater than 1 […]

PMCID: 4236730
PMID: 25080170
DOI: 10.1186/s12870-014-0197-3

[…] two different tools, and compared the results based on sequence consensus alignment and annotation to different plant promoter databases. as expected, different motifs were detected by musa [] and promzea [] as overrepresented in the promoters of apical growth genes (figure ). while we were not able to find correspondence to many of the motifs identified by musa within the publicly available […]

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Promzea institution(s)
Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada

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