Tool stats & trends
Looking to identify usage trends or leading experts?
|Restrictions to use||None|
Publication for ProPortal
Adaptive Evolution of Phosphorus Metabolism in Prochlorococcus
[…] d against the MED4 reference genome (NCBI GenBank: BX548174.1). Metabolic genes which were excluded from HMM hits were individually examined using different resources (NCBI, UniProt, IMG, BioCyc, and ProPortal). General and unbalanced reactions were excluded, and extensive manual curation was performed for the gap-filling and balancing process, due in part to the conservative reaction assignment c […]
Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
[…] s constructed from automated MUSCLE alignments of orthologous sequences within each cluster using HMMER. The clusters described here are noted as ‘V4’ CyCOGs in the associated Data Records and on the ProPortal website (Data Citation 1). […]
Toward a systems level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria
[…] nomes available. The curation results in detailed descriptions for many clusters of gene orthologs, which can be retrieved using a search engine with different options (fast/advanced) set by the user.ProPortal (http://proportal.mit.edu/) aims to provide easy access to the growing genetic database devoted to the cyanobacterium Prochlorococcus and its phages; to facilitate its use as a model system […]
Looking to check out a full list of citations?
Be the first to review ProPortal