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PROSHIFT specifications

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Unique identifier OMICS_05512
Name PROSHIFT
Interface Web user interface
Restrictions to use Academic or non-commercial use
Computer skills Basic
Stability Stable
Maintained Yes

Publication for PROSHIFT

PROSHIFT citations

 (2)
library_books

Bayesian inference of protein structure from chemical shift data

2015
PeerJ
PMCID: 4375973
PMID: 25825683
DOI: 10.7717/peerj.861

[…] calculated chemical shifts. A different approach was used by , where the contribution of the experimental chemical shifts were set relative to 1 or 0 depending on whether or not the difference to the PROSHIFT prediction () exceeded a maximum tolerance. The reasoning for not using a quadratic potential was that the experimental NMR data was automatically assigned and a quadratic potential is more s […]

library_books

Protein Structure Validation and Refinement Using Amide Proton Chemical Shifts Derived from Quantum Mechanics

2013
PLoS One
PMCID: 3877219
PMID: 24391900
DOI: 10.1371/journal.pone.0084123

[…] ormation that is being used increasingly in the determination of protein structure and dynamics. This is made possible primarily by empirical chemical shift predictors such as SHIFTS, SPARTA, SHIFTX, PROSHIFT, and CamShift –. While these methods generally offer quite accurate predictions, the predicted chemical shifts of backbone amide protons () tend to be significantly less accurate than, for ex […]


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PROSHIFT institution(s)
University of Washington, Department of Biochemistry, Seattle, WA, USA

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