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ProStaR specifications


Unique identifier OMICS_18445
Name ProStaR
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 1.12.18
Stability Stable
testthat, BiocStyle, R(>=3.5), data.table, R.utils, htmlwidgets, XML, shiny, DT, shinythemes, webshot, shinyBS, shinyAce, shinyjs, DAPAR(>=1.12.10), DAPARdata(>=1.10.2), rhandsontable, highcharter, later
Maintained Yes




No version available



  • person_outline Samuel Wieczorek <>
  • person_outline Florence Combes <>
  • person_outline Thomas Burger <>

Publication for ProStaR

ProStaR citations


Retrograde type a dissection in a 24th gestational week pregnant patient – the importance of interdisciplinary interaction to a successful outcome

PMCID: 5930859
PMID: 29720205
DOI: 10.1186/s13019-018-0724-7

[…] to obliterate possible retrograde perfusion to the aortic arch. under general anaesthesia percutaneous access to the right common femoral artery was achieved. after pre-placement of sutures of prostar xl® closure device (abbott vascular, santa clara, ca, usa), a 10f sheath was introduced and angiograms of the thoracic and abdominal aorta were performed with a pigtail catheter. […]


Diversity of cultivable fungal endophytes in Paullinia cupana (Mart.) Ducke and bioactivity of their secondary metabolites

PMCID: 5897019
PMID: 29649297
DOI: 10.1371/journal.pone.0195874

[…] chromatography using c-18 resin (230–400 mesh, merck) as stationary phase and ch3oh:h2o (3:7, 7:3 and 10:0 v/v) as eluent., high-performance liquid chromatography (hplc) was performed in the varian prostar 215 chromatograph and data were acquired using the software galaxie chromatography data system (varian). the ch3oh fraction from t. asperellum (1bda) was subjected to semi-preparative hplc […]


The heparan sulfate 3 O sulfotransferases (HS3ST) 2, 3B and 4 enhance proliferation and survival in breast cancer MDA MB 231 cells

PMCID: 5856405
PMID: 29547633
DOI: 10.1371/journal.pone.0194676

[…] with water to a final volume of 200 μl and applied to a kinetex core-shell c18-column (phenomenex, le pecq, france) equilibrated in 60 mm ammonium acetate, ph 5.6 (eluent a), running on a varian prostar 260 hplc system. after a 7 ml gradient of 0–10% solution b (100% methanol), disaccharides were eluted over a 35 ml linear gradient of 10–30% solution b at a flow rate of 0.7 ml/min. […]


Defining the Structure of a Protein–Spherical Nucleic Acid Conjugate and Its Counterionic Cloud

PMCID: 5879473
PMID: 29632884
DOI: 10.1021/acscentsci.7b00577

[…] supports on a mm48 bioautomation dna synthesizer or an abi 392/394 synthesizer using reagents from glen research. the synthesized dna strands were subsequently purified using rp-hplc on a varian prostar hplc system. the base sequence of the single stranded dna used is as follows: 5′-dbco dt-(sp18)2-aacgactcatattaacaa-3′. dbco dt refers to a dibenzocyclooctyne phosphoramidite (), and sp18 […]


Detection of PRMT1 inhibitors with stopped flow fluorescence

PMCID: 5843908
PMID: 29535867
DOI: 10.1038/s41392-018-0009-6

[…] trifluoroacetic acid (tfa), 2.5% h2o, and 2.5% triisopropylsilane. it was then precipitated in cold ether and pelleted by centrifugation. crude peptides were collected and purified using a varian prostar instrument equipped with a c18 reversed-phase high-performance liquid chromatography (rp-hplc) column, where 0.05% tfa in water and 0.05% tfa in acetonitrile were the two mobile phases used […]


Curcumin Prevents Acute Neuroinflammation and Long Term Memory Impairment Induced by Systemic Lipopolysaccharide in Mice

PMCID: 5845393
PMID: 29556196
DOI: 10.3389/fphar.2018.00183

[…] 200 μl of internal standard stock solution. samples were vortexed and centrifuged at 13,000 rpm for 20 min., analysis was carried out using an agilent 1260 series hplc chromatograph equipped with a prostar 410 autosampler (varian, inc., palo alto, ca, united states) and coupled with a varian 320 tqd ms spectrometer (varian). the mass spectrometer was equipped with an electrospray ionization […]

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ProStaR institution(s)
Université Grenoble Alpes, BIG-BGE, Grenoble, France; CEA, BIG-BGE, Grenoble, France; INSERM, BGE, Grenoble, France; Computational Proteomics Unit, Cambridge, UK; Cambridge Center for Proteomics, Cambridge, UK; CNRS, BIG-BGE, Grenoble, France
ProStaR funding source(s)
Supported by ANR-2010-GENOM-BTV-002-01 (ChloroTypes), ANR-10-INBS-08 (ProFI project, ‘Infrastructures Nationales en Biologie et Sante’, ‘Investissements d’Avenir’), EU FP7 program (Prime-XS Project, Contract no. 262067), the Prospectom project (Mastodons 2012 CNRS Challenge) and the BBSRC Strategic Longer and Larger grant (Award BB/L002817/1).

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