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Lysine acetylation site prediction software tools | Post-translational modification analysis

Lysine acetylation is a crucial type of protein post-translational modification, which is involved in many important cellular processes and serious diseases. However, identification of protein acetylated sites through traditional experiment methods…
NetAcet
Web

NetAcet

A neural network based method for prediction of N-terminal acetylation-by far…

A neural network based method for prediction of N-terminal acetylation-by far the most abundant post-translational modification in eukaryotes. The method was developed on a yeast dataset for…

GPS-PAIL
Web
Desktop

GPS-PAIL

Performs a large-scale analysis to annotate potential histone…

Performs a large-scale analysis to annotate potential histone acetyltransferases (HATs) for known acetylation sites in nine eukaryotic organisms. GPS-PAIL provides online service and local packages.…

iPTM-mLys
Web

iPTM-mLys

Identifies multiple lysine post-translational modification (PTM) sites and…

Identifies multiple lysine post-translational modification (PTM) sites and their different types. iPTM-mLys represents the first multi-label PTM predictor ever established. The novel predictor is…

NT-AcPredictor
Desktop

NT-AcPredictor N-Terminal Acetyl Predictor

Provides transparent processing pathway. The NT-AcPredictor is able to predict…

Provides transparent processing pathway. The NT-AcPredictor is able to predict accurately the N-terminal acetylation status of proteins for which the N-termini had not been experimentally…

PSKAcePred
Web

PSKAcePred

A position-specific method for lysine acetylation prediction based on support…

A position-specific method for lysine acetylation prediction based on support vector machines. The residues around the acetylation sites were selected or excluded based on their entropy values. We…

KA-predictor
Desktop

KA-predictor lysine (K) Acetylation predictor

Predicts species-specific lysine acetylation sites based on support vector…

Predicts species-specific lysine acetylation sites based on support vector machine (SVM) classifier. KA-predictor was designed for four species, H. sapiens, M. musculus, E. coli, and S. typhimurium.…

Extraction and…
Desktop

Extraction and Calculation Of Unbiased N-Termini

Scores all characterized peptides using discriminating parameters to identify…

Scores all characterized peptides using discriminating parameters to identify bona fide mature protein N-termini. EnCOUNTer determines the N-terminus acetylation yield of the most reliable ones. It…

PLMLA
Web

PLMLA

Predicts lysine methylation and lysine acetylation only from the protein…

Predicts lysine methylation and lysine acetylation only from the protein primary sequence. PLMLA is an algorithm implemented in a web app that consider not only protein sequence information but also…

ASEB
Desktop
Web

ASEB Acetylation Set Enrichment Based

Predicts not only the acetylation state, but also the responsible the lysine…

Predicts not only the acetylation state, but also the responsible the lysine (K)-acetyl-transferase (KAT) family. The efficacy of ASEB is validated via independent methods, including biological…

PTMProber
Web

PTMProber

A homology-based pipeline that allows identification of potential modification…

A homology-based pipeline that allows identification of potential modification sites for most of the proteomes lacking post-translational modifications (PTMs) data. PTMProber provides a unique…

N-Ace
Web

N-Ace

A web tool for predicting the protein Acetylation site based on support vector…

A web tool for predicting the protein Acetylation site based on support vector machine (SVM), which is training depend on the amino acid sequence and other structural characteristics, such as…

BRABSB-PHKA
Web
PAIL
Web

PAIL Prediction of Acetylation on Internal Lysines

A protein acetylation prediction program implemented in a BDM (Bayesian…

A protein acetylation prediction program implemented in a BDM (Bayesian discriminant method) algorithm. The accuracies of PAIL are 85.13%, 87.97%, and 89.21% at low, medium, and high thresholds,…

LysAcet
Web

LysAcet

A lysine acetylation prediction algorithm. When compared with other methods or…

A lysine acetylation prediction algorithm. When compared with other methods or existing tools, LysAcet is the best predictor of lysine acetylation, with K-fold (5- and 10-) and jackknife…

LAceP
Web

LAceP

A lysine acetylation site prediction system based on a logistic regression…

A lysine acetylation site prediction system based on a logistic regression model. In practice, the amino acid sequence of the acetylated sites, the physicochemical property of the amino acids and the…

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