tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Protein ANNotation with Z-score PANNZER

Online

A high-throughput tool for more reliable functional annotation. PANNZER predicts Gene Ontology (GO) classes and free text descriptions about protein functionality. It uses weighted k-nearest neighbour methods with statistical testing to maximize the reliability of a functional annotation.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Sort by:

1 user review

1 user review

Daniel Smith's avatar image

Daniel Smith

Excellent tool!

PANNZER forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

PANNZER versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.

No versioning.

PANNZER classification

PANNZER specifications

Software type:
Package/Module
Restrictions to use:
None
Database management system:
MySQL
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
Python, MySQL database, NCBI blastall

PANNZER support

Maintainer

  • Patrik Koskinen <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

Department of Biosciences, University of Helsinki, Helsinki, Finland and Institute of Biotechnology, University of Helsinki, Helsinki, Finland

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.