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Disulfide bonding detection software tools | Protein structure data analysis

Disulfide bonds play an important role in protein folding and structure stability. Accurately predicting disulfide bonds from protein sequences is important for modeling the structural and functional characteristics of many proteins.Source…
TargetDisulfide
Web

TargetDisulfide

Predicts protein disulfide connectivity. TargerDisulfide is based on a random…

Predicts protein disulfide connectivity. TargerDisulfide is based on a random forest regression model to proceed prediction and discriminative features derived from the predicted protein 3D…

DisLocate
Web

DisLocate

Predicts bonding state and connectivity patterns of cysteine residues in a…

Predicts bonding state and connectivity patterns of cysteine residues in a protein chain. DisLocate is based on machine learning methods that are Grammatical-Restrained Hidden Conditional Random…

DISC
Desktop

DISC DISulfide bond Characterization

Allows representation of a variety of ion products resulted from both single…

Allows representation of a variety of ion products resulted from both single cleavage and multiple cleavages on the disulfide bonding structure. DISC is capable of characterizing post-translational…

Cyscon
Web

Cyscon

A disulfide bond predictor. The most confident disulfide bonds are first…

A disulfide bond predictor. The most confident disulfide bonds are first identified and bonding prediction is then focused on the remaining cysteine residues based on SVR training. Compared to purely…

EDBCP
Web

EDBCP Ensemble-based Disulfide Bonding Connectivity Pattern

Provides prediction of disulfide bonding connectivity pattern without the prior…

Provides prediction of disulfide bonding connectivity pattern without the prior knowledge of the bonding state of cysteines. The method used in this server improves the accuracy of disulfide…

DiANNA
Web

DiANNA

Outputs the disulfide connectivity prediction given input of a protein sequence.

Outputs the disulfide connectivity prediction given input of a protein sequence.

DISULFIND
Web

DISULFIND

A server for predicting the disulfide bonding state of cysteines and their…

A server for predicting the disulfide bonding state of cysteines and their disulfide connectivity starting from sequence alone.

DIpro
Desktop
Web

DIpro DIsulphide bridge prediction

A framework for disulphide bridge predictions. DIpro provides graphical models…

A framework for disulphide bridge predictions. DIpro provides graphical models and recursive neural networks to predict the bonding probability of each pair of cysteines, leveraging in addition…

x3CysBridges
Web

x3CysBridges

A tool designed for biologists that attempt to determine the three-dimensional…

A tool designed for biologists that attempt to determine the three-dimensional structure of protein molecules. Based on the fact that disulfide bridges add strong constraints to the native structure,…

CYSPRED
Web

CYSPRED

Trained to distinguish the bonding states of cysteine in proteins starting from…

Trained to distinguish the bonding states of cysteine in proteins starting from the residue chain.

Dinosolve
Web

Dinosolve

An approach of enhancing disulfide bonding prediction accuracy by taking…

An approach of enhancing disulfide bonding prediction accuracy by taking advantage of context-based features.

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