Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Protein Feature Engineering Toolkit ProFET

Online

Allows easy, universal discovery of new target proteins, as well as understanding the features underlying different high-level protein functions. ProFET extracts hundreds of features covering the elementary biophysical and sequence derived attributes. Most features capture statistically informative patterns. In addition, different representations of sequences and the amino acids (AA) alphabet provide a compact, compressed set of features. The results from ProFET were incorporated in data analysis pipelines, implemented in python, and adapted for multi-genome scale analysis.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

ProFET forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

ProFET classification

ProFET specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Python
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
Pandas, Numpy, SciKit-learn, BioPython

ProFET distribution

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

ProFET support

Documentation

Maintainer

  • Michal Linial <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Department of Biological Chemistry, Institute of Life Sciences, The Edmond J Safra Campus, The Hebrew University of Jerusalem, Givat Ram, Israel

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.