Protein generator statistics

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Protein generator specifications

Information


Unique identifier OMICS_24438
Name Protein generator
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A bacterial genome, A file from the Glimmer gene prediction tool, and a relevant translation table that maps each codon to an amino acid or stop codon.
Output format FASTA
Operating system Unix/Linux
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Marc Wilkins <>

Publication for Protein generator

Protein generator in publications

 (3)
PMCID: 5845869
PMID: 29563903
DOI: 10.3389/fmicb.2018.00393

[…] protein calculator v3.4 server (the scripps research institute; http://www.scripps.edu/~cdputnam/protcalc.html), respectively. shuffle variants of fr-2 and fr-4 were generated by the random shuffle protein generator of sequence manipulation suite (stothard, ). secondary structure of nfap2 was predicted by psipred (v3.3) protein analysis workbench (buchan et al., )., nfap2 and its peptide […]

PMCID: 5449476
PMID: 28620404
DOI: 10.3389/fpls.2017.00910

[…] maize is larger than all other grains, including rice, wheat and barley. compared to maize leaves and roots, the seed is more stable and has higher production yields, making it an efficient target protein generator (; ). it has also been suggested that antigens produced in the seeds are safer (). the production of rabies g proteins in maize seeds was approximately 25 μg/g of seed weight (). […]

PMCID: 4675711
PMID: 26490728
DOI: 10.1093/dnares/dsv024

[…] was synthesized and cloned between the two homologous recombination sequences of each vector. to evaluate the proper transcriptional insulation of the interface, a promoterless green fluorescent protein generator (gfp; biobrick composite part bba_e0240) was cloned in the psnnk plasmid series, and synechocystis mutants were produced (mutants snnk.gfp, table and supplementary table s7). […]


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Protein generator institution(s)
Systems Biology Initiative, The University of New South Wales, Sydney, NSW, Australia; School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, NSW, Australia; Intersect Australia Limited, Sydney, NSW, Australia; Endocrine Research Laboratory (KMEB), Department of Endocrinology and Metabolism, Odense University Hospital & University of Southern Denmark, Odense, Denmark
Protein generator funding source(s)
Supported by the Australian National Data Service (ANDS), the New South Wales State Government Science Leveraging Fund, the EIF Super Science scheme, the University of New South Wales and the Australian Research Council.

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