Protein sequence analysis | Proteomics

Protein sequence analysis steps

Protein sequence analysis | Proteomics

Most Recent Tools

ProtVista
Desktop

ProtVista

Permits to visualize graphical representation of protein sequence features in…

Permits to visualize graphical representation of protein sequence features in the UniProt Knowledgebase, experimental proteomics and variation public datasets. ProtVista lays out, maps, orients, and…

pepwindow
Desktop

pepwindow

Draws a hydropathy plot for a protein sequence. pepwindow draws a classic Kyte…

Draws a hydropathy plot for a protein sequence. pepwindow draws a classic Kyte & Doolittle hydropathy plot for a protein sequence. It calculates hydropathy in windows of a specified size over the…

pepnet
Desktop

pepnet

Draws a helical net for a protein sequence. pepnet is a method of displaying…

Draws a helical net for a protein sequence. pepnet is a method of displaying the residues of a protein in a simple 3,4,3,4 repeating pattern that emulates at a simple level the arrangement of…

charge
Desktop

charge

Draws a protein charge plot. charge reads a protein sequence and writes a file…

Draws a protein charge plot. charge reads a protein sequence and writes a file (or plots a graph) of the mean charge of the amino acids within a window of specified length as the window is moved…

Most Popular Tools

footprintDB
Data

footprintDB

Integrates several open access repositories of curated cis-elements, DNA…

Integrates several open access repositories of curated cis-elements, DNA motifs, and TFs into a unique repository. footprintDB systematically annotates the binding interfaces of the TFs by exploiting…

PlantTFDB
Data

PlantTFDB Plant Transcription Factor Database

A database of functional and evolutionary study of plant transcription factors.…

A database of functional and evolutionary study of plant transcription factors. With the version 4.0, PlantTFDB offers 320 370 TFs from 165 species. Three types of annotation provide more directly…

PLACE
Data

PLACE

A database of nucleotide sequence motifs found in plant cis-acting regulatory…

A database of nucleotide sequence motifs found in plant cis-acting regulatory DNA elements. Motifs were extracted from previously published reports on genes in vascular plants. In addition to the…

POLYVIEW-MM
Web

POLYVIEW-MM

Integrates high-quality animation of molecular motion (MM) with structural and…

Integrates high-quality animation of molecular motion (MM) with structural and functional analysis of macromolecules.

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