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Protein similarity network generation software tools | Pathway analysis

Protein similarity networks are graphical representations of sequence, structural and other similarities among proteins for which pairwise all-by-all similarity connections have been calculated. Mapping of biological and other information to network…
Pythoscape
Desktop

Pythoscape

Creates and manages protein similarity networks. Pythoscape provides several…

Creates and manages protein similarity networks. Pythoscape provides several options to calculate pairwise similarities for input sequences or structures, applies filters to network edges and defines…

PANADA
Web
Desktop

PANADA Protein Association Network Annotation Determination and Analysis

Generates protein similarity networks to be used with Cytoscape. PANADA allows…

Generates protein similarity networks to be used with Cytoscape. PANADA allows the user to either automatically search similar sequences or to generate a network with a set of selected proteins. The…

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