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ProteinMagicBlast

Identifies between proteins and sequenced mRNAs. ProteinMagicBlast assists users in determining if a mutation modifies an amino acid in a protein and if a modified protein has the same function.

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ProteinMagicBlast classification

ProteinMagicBlast specifications

Unique identifier:
OMICS_24713
Interface:
Command line interface
Input data:
Some SRA(s) accession and interested RefSeq protein accession.
Operating system:
Unix/Linux
License:
MIT License
Stability:
Stable
Maintained:
Yes
Software type:
Application/Script
Restrictions to use:
None
Output data:
The protein alignments and changes in amino acids.
Programming languages:
Python
Computer skills:
Advanced
Requirements:
pysam, pyfaidx, PyVCF, Magic-BLAST, BLAST+, freebayes

ProteinMagicBlast distribution

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ProteinMagicBlast support

Documentation

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