Aims to fully represent all relevant aspects of a proteomics experiment and to make them easily accessible to the user.
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Provides a resource of protein phosphorylation data from multiple plants. With the large-scale phosphorylation data and associated web-based tools, P3DB will be a valuable resource for both plant and nonplant biologists in the field of protein phosphorylation.
Provides information on 217 proteins identified in a proteomic analysis of nucleoli isolated from Arabidopsis cell culture.
Domiciles proteomic and genomic information on 150 HPV strains sequenced to date. Retreival of such vast information from different resources with a provision of prediction and validation of proteins structures would help researchers in designing the strain specific drugs/vaccines to prevail over the cancerous consequences.
Offers a seamless integration of and navigation through protein-related data. NeXtProt contains proteomics data for over 85% of human proteins. Moreover, this tool includes over 8000 phenotypic observations for over 4000 variations in a number of genes involved in hereditary cancers and channelopathies. All of the data are available via a user interface and FTP site. An API access and a SPARQL endpoint are also provided for more technical applications.
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Discover our proposed protocols.
They are easy to use or edit to meet your needs.
They are easy to use or edit to meet your needs.
Functional analysis of novel SNPs and mutations in human and mouse genomes
Tools (4):
RESCUE-ESE, PolyPhen, FastSNP, HUMA
Topics (3):
WGS analysis, Mus musculus, Homo sapiens
Isoform Evolution in Primates through Independent Combination of Alternative RNA Processing Events
Tools (4):
BLAT, InterProScan, DAVID, ProteomicsDB
Topics (7):
CAGE analysis, De novo sequencing analysis, Metatranscriptomic sequencing analysis, ChIP-seq analysis, RNA-seq analysis, Metagenomic sequencing analysis, Genome annotation
Phylogenomic analyses of malaria parasites and evolution of their exported proteins
Tools (4):
HaMStR, MAFFT, Gblocks, Integr8
Topics (6):
Metagenomic sequencing analysis, De novo sequencing analysis, Genome annotation, Plasmodium falciparum, Malaria, Malaria
Prediction and analysis of three gene families related to leaf rust (Puccinia triticina) resistance in wheat (Triticum aestivum L.)
Tools (4):
InterProScan, BLASTP, InterPro, Wheat Proteome
Topics (1):
Protein sequence analysis