Proteus statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Proteus

Tool usage distribution map

This map represents all the scientific publications referring to Proteus per scientific context
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Associated diseases

This word cloud represents Proteus usage per disease context

Popular tool citations

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Proteus specifications


Unique identifier OMICS_13241
Name Proteus
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Single amino acid sequence
Input format Fasta
Output data ‘Disorder-to-order' transitioning binding residues segment prediction score vs. Residue
Output format CSV, PNG
Operating system Unix/Linux, Mac OS
Programming languages C, C++, Perl, Python
Computer skills Advanced
Stability Stable
Numpy, Scipy, Matplotlib, SciKit-learn, iPython, seaborn, uniref90.fasta
Source code URL
Maintained Yes


No version available



  • person_outline Bjorn Wallner

Publication for Proteus

Proteus citations


Proceedings of the Canadian Frailty Network Summit: Medication Optimization for Frail Older Canadians, Toronto, Monday April 24, 2017

PMCID: 5740949
PMID: 29296132
DOI: 10.5770/cgj.20.293

[…] ot have a medication reconciliation conducted upon discharge from hospital.In regard to using technology to facilitate medication optimization, Osborn identified two examples: “Patients Like Me” and “Proteus Discover”. “Patients Like Me” is a free online information sharing resource with 500,000 members that share information and track/report their health status on 30–40 chronic conditions, using […]


Real Time Microbiology Laboratory Surveillance System to Detect Abnormal Events and Emerging Infections, Marseille, France

PMCID: 4517727
PMID: 26196165
DOI: 10.3201/eid2108.141419
call_split See protocol

[…] The MARSS surveillance program has been used since April 2013. Fifteen bacterial species are monitored by MARSS, including Escherichia coli, Klebsiella pneumoniae, K. oxytoca, Proteus mirabilis, Enterobacter cloacae, Enterobacter aerogenes, Morganella morganii, Serratia marcescens, Pseudomonas aeruginosa, Acinetobacter baumannii, Streptococcus agalactiae, Enterococcus faeca […]

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Proteus institution(s)
Bioinformatics Division, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden

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