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protk specifications


Unique identifier OMICS_24281
Name protk
Alternative name Proteomics toolkit
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Ruby
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Ira Cooke

protk citation


mMass as a Software Tool for the Annotation of Cyclic Peptide Tandem Mass Spectra

PLoS One
PMCID: 3441486
PMID: 23028676
DOI: 10.1371/journal.pone.0044913

[…] ssarily suited for the natural product or synthetic chemist working with cyclic peptides.Most of the available tools with a graphical user interface (GUI; e.g. ProteinProspector , InSilicoSpectro , , Proteomics Toolkit , PeptideART , mMass ) are suited for the in-silico fragmentation and annotation of linear peptides but do not offer the same functionality for cyclic peptides. In addition, mainly […]

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