protr/ProtrWeb specifications
Information
| Unique identifier | OMICS_07467 |
|---|---|
| Name | protr/ProtrWeb |
| Alternative name | ProtrWeb |
| Software type | Toolkit/Suite |
| Interface | Command line interface |
| Restrictions to use | None |
| Input data | A protein sequence. |
| Input format | FASTA |
| Output data | Proteochemometrics modeling descriptors |
| Output format | CSV |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | R |
| License | BSD 3-clause “New” or “Revised” License |
| Computer skills | Advanced |
| Version | 1.5-1 |
| Stability | Stable |
| Requirements |
Biostrings, rmarkdown, knitr, foreach, org.Hs.eg.db, GOSemSim, doParallel, R(≥3.0.2)
|
| Maintained | Yes |
Versioning
Add your version
Documentation
- Documentation: https://cran.r-project.org/web/packages/protr/protr.pdf
Maintainer
- person_outline Nan Xiao <>
Information
| Unique identifier | OMICS_07467 |
|---|---|
| Name | protr/ProtrWeb |
| Alternative name | ProtrWeb |
| Interface | Web user interface |
| Restrictions to use | None |
| Input data | A protein sequence |
| Input format | FASTA |
| Output data | Proteochemometrics modeling descriptors |
| Output format | CSV |
| Programming languages | R |
| Computer skills | Basic |
| Version | 0.5-1 |
| Stability | Stable |
| Maintained | Yes |
Documentation
- Documentation: https://cran.r-project.org/web/packages/protr/protr.pdf
Maintainer
- person_outline Nan Xiao <>
Publication for protr/ProtrWeb
library_books
Protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences.
2015 Bioinformatics
PMID: 25619996
protr/ProtrWeb institution(s)
School of Mathematics and Statistics, Central South University, Changsha, China
protr/ProtrWeb funding source(s)
This study was supported by the National key basic research program (2015CB910700) and the National Natural Science Foundation of China (Grants No. 81402853 and 11271374) and the Postdoctoral Science Foundation of Central South University.
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