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ProViz specifications


Unique identifier OMICS_08982
Name ProViz
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 2.0
Computer skills Medium
Stability No
Maintained No


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ProViz in publications

PMCID: 5540468
PMID: 28804499
DOI: 10.1155/2017/1278932

[…] of interest at a glance, no empirical feedback on the tools' scalability was obvious., to shortly mention representative tools in the field, 2d standalone applications like graphvizdb [], ondex [], proviz [], vizant [], guess [], ucinet [], mapman [], patika [], medusa [], or osprey [] as well as 3d visualization tools such as arena3d [, ] and biolayout express [] already exist. […]

PMCID: 2636684
PMID: 19040716
DOI: 10.1186/1756-0381-1-12

[…] capabilities, osprey is a powerful tool for network manipulation. the ability to incorporate new interactions into an already existing network might be considered the tool's biggest asset., proviz is a standalone open source application under the gpl license., it comes with both 2d and pseudo-3d display support to render data. it can manipulate single graphs in large-scale datasets […]

PMCID: 2424176
PMID: 18617988
DOI: 10.1371/journal.pcbi.1000108

[…] that provides a basis for new methodologies. one immediate example is visualisation. several tools exist to visualise biological networks, such as cytoscape , pajek , osprey , navigator , visant , proviz , move and graphviz . however, it is often the case that the amount of information being visualised–the number of edges and edge crossings–makes it difficult to visually explore the networks […]

PMCID: 1751531
PMID: 17145710
DOI: 10.1093/nar/gkl958

[…] furthermore, the currently displayed interaction network can be saved in either psi-mi xml 1.0 or 2.5. doing so allow users to import their data into third party tools, such as cytoscape () or proviz () to enable further analysis., over the past two years, we have introduced new applications allowing users to perform analysis of interaction networks. mine (minimal connecting interaction […]

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ProViz institution(s)
LaBRI UMR 5800, Université Bordeaux, Talence, France
ProViz funding source(s)
This work is supported by EU grant number QLRI-CT-2001−00015 under the RDD programme ‘Quality of Life and Management of Living Resources’.

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