0 user reviews
0 user reviews
Already have an account? Sign in to review this tool.
No review has been posted.
No open topic.
- Software type:
- Restrictions to use:
- GNU General Public License version 3.0
- Source code URL:
- Command line interface
- Programming languages:
- Computer skills:
(Mahjani et al., 2016) A flexible computational framework using R and Map-Reduce for permutation tests of massive genetic analysis of complex traits. IEEE/ACM Transactions on Computational Biology and Bioinformatics.
- Sverker Holmgren <Sverker.Holmgren at it.uu.se>
Division of Scientific Computing, Department of Information Technology, Uppsala University, Uppsala, Sweden; Helsinki Institute of Physics, University of Helsinki, Helsinki, Finland; Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden
Link to literature
Related QTL mapping tools
Simulates large-scale genotyping data in multiple and complex livestock…
Simulates large-scale genotyping data in multiple and complex livestock pedigrees. QMSim helps to validate new approaches for fine mapping and genomic selection. The simulation is basically carried…
A web server-based tool for analysing polygenic epistatic effects. PEPIS is…
A web server-based tool for analysing polygenic epistatic effects. PEPIS is based on a linear mixed model that has been used to predict the performance of hybrid rice. It includes two main…
A web service wrapped around our previously published algorithm EXPLoRA, which…
A web service wrapped around our previously published algorithm EXPLoRA, which exploits linkage disequilibrium (LD) to increase the power and accuracy of quantitative trait loci identification in…
Aims at mining quantitative trait loci (QTLs) for candidate genes.…
Aims at mining quantitative trait loci (QTLs) for candidate genes. Marker2sequence, for each gene, within the QTL region, uses data integration technology to integrate putative gene function with…