PRVCS statistics

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PRVCS specifications

Information


Unique identifier OMICS_12387
Name PRVCS
Alternative name Predicting regulatory variant with composite statistic
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format VCF or ANNOVAR
Output format TEXT, VCF or ANNOVAR
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java, Perl
Computer skills Advanced
Stability Stable
Requirements
Tabix
Maintained Yes

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  • person_outline Junwen Wang <>

Publication for Predicting regulatory variant with composite statistic

PRVCS in publication

PMCID: 3090780
DOI: 10.1186/1471-2202-11-S1-O12

[…] on stimulus phase. interestingly, the input-phase dependence of skipped spike events mirrored the phase-dependent variance in the prc itself (which we plotted as phase response-variance curves, prvcs). this indicates that dendritic sk determines not only the mean response, but also the variance of responses, to excitatory dendritic inputs. average somatic and dendritic prcs were type […]


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PRVCS institution(s)
Department of Statistics, Harvard University, Cambridge, Boston, MA, USA; Centre for Genomic Sciences, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China; School of Biomedical Sciences, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China; Department of Anaesthesiology, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China; Department of Psychiatry and Centre for Reproduction, Development and Growth, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong, China; Department of Health Sciences Research, Center for Individualized Medicine, Mayo Clinic, Scottsdale, AZ, USA; Department of Biomedical Informatics, Arizona State University, Scottsdale, AZ, USA
PRVCS funding source(s)
Supported by startup funds from Mayo Clinic (Mayo Clinic Arizona and Center for Individualized Medicine), The National Institute of Health R01 GM113242-01 and Health and Medical Research Fund, Hong Kong SA, 01121436.

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