Pscan specifications

Information


Unique identifier OMICS_09256
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Version 1.3
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Giulio Pavesi <>

Information


Unique identifier OMICS_09256
Interface Web user interface
Restrictions to use None
Programming languages C++
Computer skills Basic
Version 1.3
Stability Stable
Maintained Yes

Maintainer


  • person_outline Giulio Pavesi <>

Pscan article

Pscan citation

2017
PMCID: 5261807

[…] 0.05 and a fold change below -2 or above 2 (s5 table). gene ontology analysis was performed using the generic go-term mapper developed by the max planck institute (http://cpdb.molgen.mpg.de/ycpdb)., pscan tool was used to explore the promoter of the genes which are downregulated in bdf1-y187f-y354f 4 and 8h after sporulation induction (http://159.149.160.88/pscan/, [75]). binding motifs […]

Pscan institution(s)
Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan; Dipartimento di Biochimica e Biologia Molecolare ‘E Quagliariello’, University of Bari; Istituto Tecnologie Biomediche—Consiglio Nazionale delle Ricerche, Bari, Italy
Pscan funding source(s)
Italian Ministry of Education and Scienfic Research (MIUR) within the FIRB project ‘Laboratorio Internazionale di Bioinformatica’ (LIBI)

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