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Pseudogene Decoration resource psiDR

Online

Contains genomic information relating to each pseudogene in a consistent manner. psiDR provides a variety of activity information for all the surveyed pseudogenes. It can supply potential targets for further experimental follow-up. It allows users to classify pseudogenes with various attributes, and permits identifying expressed pseudogenes. This database is useful to better understand the regulatory role of pseudogenes, especially in cancer and other developmental processes.

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psiDR classification

psiDR specifications

Restrictions to use:
None
Data access:
Browse
Maintained:
Yes
Community driven:
No
User data submission:
Not allowed

psiDR support

Maintainer

  • Mark Gerstein <>

Credits

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Publications

Institution(s)

Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; Wellcome Trust Sanger Institute, Welcome Trust Campus, Hinxton, Cambridge, UK; Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland; Center for Biomolecular Science and Engineering University of California, Santa Cruz, CA, USA; Centre for Genomic Regulation (CRG) and UPF, Barcelona, Catalonia, Spain; Department of Computer Science, Yale University, New Haven, CT, USA

Funding source(s)

Supported by National Human Genome Research Institute (NHGRI)/National Institutes of Health (NIH) grants to the GENCODE (U54 HG004555) subgroup of the ENCODE project; the Swiss National Science Foundation, and the Wellcome Trust (WT077198/Z/05/Z).

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