×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Pseudomarker

Online

A set of programs written in MATLAB for the analysis of QTL data from inbred line crosses. Although Pseudomarker was originally developed based on the multiple imputation genome scan algorithm, it now includes a comprehensive set of methods. The software package provides a complete workflow in QTL data analysis including data checking and visualization, one, two and multiple QTL model genome scans with covariates, estimating and plotting QTL effect and a variety of plotting and reporting functions. Pseudomarker is specially tailored to work for analyzing large number of phenotypes efficiently, which makes the analysis of eQTL (expression QTL) data possible.

User report

×
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

Pseudomarker forum

×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

Pseudomarker versioning

×
Upload and version your source code
Get your DOI for better tool traceability. Archive your releases so the community can easily visualize progress on you work.

No versioning.

Pseudomarker classification

Pseudomarker specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
MATLAB
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes

Pseudomarker support

Maintainer

  • Gary Churchill <>

Credits

×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

The Jackson Laboratory, Bar Harbor, ME, USA

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.