PSORT specifications

Information


Unique identifier OMICS_01634
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/PSORT

Taxon


  • Animals
  • Archaebacteria
  • Eubacteria
  • Fungi
  • Plants
  • Protists

PSORT article

PSORT citations

 (3)
2017
PMCID: 5481527

[…] or n. sennetsu is not located at upstream of any of genes encoding the major omps of n. helminthoeca including p51, ssa or nsps (table 4)., a. location of outer member proteins is predicted by the psort‐b algorithm (http://psort.org/psortb). other putative omps (p51, nsp1/2/3 and ssa) are determined by homology searches to n. risticii and n. sennetsu protein database using blastp., the present […]

2016
PMCID: 4772473

[…] prediction only; s: function unknown)., abased on r. anatipestifer yb2 genome (accession number: cp007204)., bsubcellular locations were predicted by the psortb version 3.0 server (http://www.psort.org/)., cfunctional characterization of the proteins was predicted by searching against eggnog (version 3) database using blastp., dno related cog., eresults are presented as 2δδct. figures = 1 […]

2014
PMCID: 4207797

[…] genes were analyzed for putative functions using ncbi protein blast and pfam 26.0 (http://pfam.janelia.org). subcellular localization of proteins was predicted using psortb version 3.0 (http://www.psort.org/)., semiquantitative reverse transcription (rt)-pcr was performed using superscript ii reverse transcriptase as outlined by the manufacturer (invitrogen). s. aureus rna was used to make […]

PSORT institution(s)
Institute for Molecular and Cellular Biology, Osaka University, Japan

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