PsRNA pipeline

PsRNA specifications

Information


Unique identifier OMICS_22244
Name PsRNA
Software type Application/Script
Interface Web user interface
Restrictions to use None
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Jayavel Sridhar <>

Publication for PsRNA

PsRNA IN pipeline

2015
PMCID: 4570225
PMID: 26369665
DOI: 10.1186/s12864-015-1851-3

[…] 3′u6 snrnaforward primer 5′ tacagataagattagcatggcccc-3′, target prediction for drought-responsive mirnas and novel mirna candidates against indica rice 9311 fgenesh genes was conducted using psrna target: a plant small rna target analysis server [78] using default setting except the maximum expectation. this is the score of complementarity between mirna and its target, which was adjusted […]

PsRNA institution(s)
Centre of Excellence in Bioinformatics, School of Biotechnology, Madurai Kamaraj University, Madurai, India; Bioinformatics Centre, Indian Institute of Science, Bangalore, India; Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore, India
PsRNA funding source(s)
Supported by the Department of Biotechnology (DBT), Government of India.

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