psRNATarget pipeline

psRNATarget specifications

Information


Unique identifier OMICS_00414
Name psRNATarget
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Plants

Publications for psRNATarget

psRNATarget citations

 (2)
2017
PMCID: 5465084

[…] genes with unknown functions are lincrna genes21. this phenomenon has also been reported in recent studies on rice22., for these 91 phas loci, mirna binding site prediction was performed using the psrnatarget pipeline (table┬ás3). degradome datasets produced from tomato leaves, roots, and fruits were applied as the experimental supports for the identification of potential phasirna triggers. […]

2016
PMCID: 5099690

[…] method, and corrected p-value of 0.05 was set as a threshold for significant differential expression by default (love et al., 2014)., the target genes of mirnas were predicted with the web-based psrnatarget program (http://plantgrn.noble.org/psrnatarget/) (dai and zhao, 2011). the gene ontology (go)-biological process and kyoto encyclopedia of genes and genomes (kegg) pathway terms enriched […]

psRNATarget institution(s)
Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, OK, USA

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