PsRobot protocols

PsRobot specifications


Unique identifier OMICS_04009
Name PsRobot
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for PsRobot

PsRobot IN pipelines

PMCID: 5366869
PMID: 28345652
DOI: 10.1038/srep45132

[…] were extracted and mapped to the bryv or pemv 2 genomes by bowtie59. only the small rnas showed perfect matches to the sense or antisense viral genomic sequences were identified as vsirnas., the psrobot program was used to predict plant transcripts targeted by vsirnas generated from bryv and pemv 2 in co-infected n. benthamiana plants45. the go analysis was conducted to annotate […]

PMCID: 4248235
PMID: 25430002
DOI: 10.1038/ncomms6630

[…] used to find the differentially expressed genes (de genes) between can-0 and hen-16. gene function analysis (go enrichment) was performed with the david tool46. plant mirna targets were predicted by psrobot31. microarray data were downloaded from geo (accession id: gse349243) and rma method47 was introduced to calculate gene expression and differentially expressed genes between mta mutant […]

PsRobot institution(s)
The State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China

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