PTMfunc specifications


Unique identifier OMICS_02426
Name PTMfunc
Restrictions to use None
Maintained Yes

Publication for PTMfunc

PTMfunc citations


Non degradative Ubiquitination of Protein Kinases

PLoS Comput Biol
PMCID: 4890936
PMID: 27253329
DOI: 10.1371/journal.pcbi.1004898

[…] In addition to the ubiquitination proteomics data that we collected in Jurkat and HEK293 cells, we used the PTMfunc database of protein PTMs [] to identify other PTMs present on human protein kinases. Functional annotations for some of these PTMs are included in the PTMfunc database []. In-house scripts wer […]


Prediction of Functionally Important Phospho Regulatory Events in Xenopus laevis Oocytes

PLoS Comput Biol
PMCID: 4552029
PMID: 26312481
DOI: 10.1371/journal.pcbi.1004362

[…] a set of 13 proteomes with currently available phosphorylation information. Putative orthologs were aligned using MUSCLE []. The phosphorylation information for the 13 species was retrieved from the ptmfunc database ( and includes phosphosite information for Saccharomyces cerevisiae, Schizosaccharomyces pombe, Plasmodium falciparum, Toxoplasma gondii, Trypanosoma brucei, Trypan […]

PTMfunc institution(s)
Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA

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