PTM analysis | Proteomics

Tandem mass spectrometry has become a standard tool for identifying post-translational modifications (PTMs) of proteins. Protein modification is an extremely important post-translational regulation that adjusts the physical and chemical properties, conformation, stability and…

PTM analysis steps

Bioinformatics tools

Databases

PTM analysis | Proteomics

Most Recent Tools

NT-AcPredictor
Desktop

NT-AcPredictor N-Terminal Acetyl Predictor

Provides transparent processing pathway. The NT-AcPredictor is able to predict…

Provides transparent processing pathway. The NT-AcPredictor is able to predict accurately the N-terminal acetylation status of proteins for which the N-termini had not been experimentally…

PGluS
Web

PGluS

Identifies S-glutathionylated sites from primary protein sequences. PGluS can…

Identifies S-glutathionylated sites from primary protein sequences. PGluS can mine the protein information by using multiple features. In order to reduce the computational time, 5-fold cross…

ADPRtool
Algorithm

ADPRtool

Predicts Asp-ADP-Ribosylation sites from human proteins. ADPRtool is based on…

Predicts Asp-ADP-Ribosylation sites from human proteins. ADPRtool is based on weighted support vector machine (WSVM), minimum redundancy maximum relevance (mRMR) and incremental feature selection…

RF-Hydroxysite
Web

RF-Hydroxysite

Identifies putative hydroxylysine and hydroxyproline residues in proteins.…

Identifies putative hydroxylysine and hydroxyproline residues in proteins. RF-Hydroxysite was tested with the jack-knife cross validation method and an independent test set. It is able to annotate…

Most Popular Tools

SwissPalm
Dataset

SwissPalm

A comprehensive, manually curated resource to study protein S-palmitoylation.…

A comprehensive, manually curated resource to study protein S-palmitoylation. SwissPalm currently encompasses more than 5000 S-palmitoylated protein hits from seven species, and contains more than…

KinomeXplorer
Desktop

KinomeXplorer

An integrated framework for modeling kinase-substrate interactions and aid in…

An integrated framework for modeling kinase-substrate interactions and aid in the design of inhibitor-based follow-up perturbation experiments.

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