Tandem mass spectrometry has become a standard tool for identifying post-translational modifications (PTMs) of proteins. Protein modification is an extremely important post-translational regulation that adjusts the physical and chemical properties, conformation, stability and activity of a protein; thus altering protein function.
Provides transparent processing pathway. The NT-AcPredictor is able to predict…
Provides transparent processing pathway. The NT-AcPredictor is able to predict accurately the N-terminal acetylation status of proteins for which the N-termini had not been experimentally…
Identifies S-glutathionylated sites from primary protein sequences. PGluS can…
Identifies S-glutathionylated sites from primary protein sequences. PGluS can mine the protein information by using multiple features. In order to reduce the computational time, 5-fold cross…
Predicts Asp-ADP-Ribosylation sites from human proteins. ADPRtool is based on…
Predicts Asp-ADP-Ribosylation sites from human proteins. ADPRtool is based on weighted support vector machine (WSVM), minimum redundancy maximum relevance (mRMR) and incremental feature selection…
Identifies putative hydroxylysine and hydroxyproline residues in proteins.…
Identifies putative hydroxylysine and hydroxyproline residues in proteins. RF-Hydroxysite was tested with the jack-knife cross validation method and an independent test set. It is able to annotate…
A comprehensive, manually curated resource to study protein S-palmitoylation.…
A comprehensive, manually curated resource to study protein S-palmitoylation. SwissPalm currently encompasses more than 5000 S-palmitoylated protein hits from seven species, and contains more than…
An integrated framework for modeling kinase-substrate interactions and aid in…
An integrated framework for modeling kinase-substrate interactions and aid in the design of inhibitor-based follow-up perturbation experiments.
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