ptRNApred specifications
Information
| Unique identifier | OMICS_06248 |
|---|---|
| Name | ptRNApred |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Programming languages | C |
| License | GNU General Public License version 2.0 |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | Yes |
Versioning
No version available
Publication for ptRNApred
library_books
PtRNApred: computational identification and classification of post-transcriptional RNA
2014 Nucleic Acids Res
PMCID: 4267668
PMID: 25303994
DOI: 10.1093/nar/gku918
ptRNApred citation
library_books
A Review on Recent Computational Methods for Predicting Noncoding RNAs
2017
Biomed Res Int
PMCID: 5434267
PMID: 28553651
DOI: 10.1155/2017/9139504
[…] , more and more de novo methods tend to combine both RNA sequence and RNA structure to improve the sensitivity and specificity in predicting ncRNAs.For example, Gupta et al. developed a new algorithm ptRNApred to identify and classify posttranscriptional RNA with dinucleotide properties of sequence and secondary structure feature, for example, numbers of loops, bulges, and hairpins or the frequenc […]
ptRNApred institution(s)
Department of Dermatology, University of Lübeck, Lübeck, Germany
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