ptRNApred statistics

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SnoRNA gene prediction

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ptRNApred specifications

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Information

Unique identifier	OMICS_06248
Name	ptRNApred
Software type	Package/Module
Interface	Command line interface
Restrictions to use	None
Operating system	Unix/Linux
Programming languages	C
License	GNU General Public License version 2.0
Computer skills	Advanced
Stability	Stable
Maintained	Yes

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Publication for ptRNApred

PtRNApred: computational identification and classification of post-transcriptional RNA.

2014 Nucleic Acids Res

PMCID: 4267668

PMID: 25303994

DOI: 10.1093/nar/gku918

ptRNApred in publication

A Review on Recent Computational Methods for Predicting Noncoding RNAs

PMCID: 5434267

PMID: 28553651

DOI: 10.1155/2017/9139504

[…] and more de novo methods tend to combine both rna sequence and rna structure to improve the sensitivity and specificity in predicting ncrnas., for example, gupta et al. developed a new algorithm ptrnapred to identify and classify posttranscriptional rna with dinucleotide properties of sequence and secondary structure feature, for example, numbers of loops, bulges, and hairpins […]

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ptRNApred institution(s)

Department of Dermatology, University of Lübeck, Lübeck, Germany

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