Obsolete

An interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and metabolic reconstructions from sequence data. PUMA2 provides a framework for comparative and evolutionary analysis of genomic data and metabolic networks in the context of taxonomic and phenotypic information. Grid infrastructure is used to perform computationally intensive tasks. PUMA2 contains precomputed analysis of 213 prokaryotic, 22 eukaryotic, 650 mitochondrial and 1493 viral genomes and automated metabolic reconstructions for >200 organisms.

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PUMA2 classification

PUMA2 specifications

Software type:
Framework
Restrictions to use:
None
Interface:
Web user interface
Computer skills:
Basic

Credits

Publications

Institution(s)

Mathematics and Computer Science Division, Argonne National Laboratory Argonne, IL, USA; Computation Institute, University of Chicago Chicago, IL, USA; University of Illinois at Chicago Chicago, IL, USA

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