As one important post-translational modification of prokaryotic proteins, pupylation plays a key role in regulating various biological processes. The accurate identification of pupylation sites is crucial for understanding the underlying mechanisms of pupylation. Source text: Ju…
Desktop app
IMP–PUP IMP–PUP

IMP–PUP

A bioinformatics tool for accurate prediction of pupylation sites. IMP–PUP is…

A bioinformatics tool for accurate prediction of pupylation sites. IMP–PUP is constructed on the composition of k-spaced amino acid pairs and trained with a modified semi-supervised self-training…

Web app
profile-based… profile-based PUpylation site Predictor

pbPUP profile-based PUpylation site Predictor

A computational tool to predict pupylation sites based on protein sequence…

A computational tool to predict pupylation sites based on protein sequence information. In particular, a sophisticated sequence encoding scheme [i.e. the profile-based composition of k-spaced amino…

Web app
Desktop app
iPUP iPUP

iPUP

A sequence-based prediction method capable of predicting pupylation sites with…

A sequence-based prediction method capable of predicting pupylation sites with probability scores for prioritizing promising pupylation sites. The iPUP is constructed by using SVM, CKSAAP and the…

Web app
Pupylation Predictor Pupylation Predictor

PupPred Pupylation Predictor

Identifies candidate pupylation sites based on the local sequence information.…

Identifies candidate pupylation sites based on the local sequence information. Although the number of experimentally determined pupylation sites will be growing in the future and these sites will be…

Desktop app
PU learning for… PU learning for pupylation sites prediction

PUL-PUP PU learning for pupylation sites prediction

Predicts pupylation sites by using positive-unlabeled learning technique. Our…

Predicts pupylation sites by using positive-unlabeled learning technique. Our experimental results indicated that PUL-PUP outperforms the other methods significantly for the prediction of pupylation…

Desktop app
GPS-PUP GPS-PUP

GPS-PUP

Serves as a powerful tool to help identify pupylation sites in prokaryotic…

Serves as a powerful tool to help identify pupylation sites in prokaryotic proteins. The large-scale prediction and functional analysis results can be used for the further investigation of molecular…

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