PureCN specifications

Information


Unique identifier OMICS_14367
Name PureCN
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Already segmented data.
Input format BAM
Output data A histogram of tumor vs. normal copy number log-ratios.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 1.2.3
Stability Stable
Requirements DNAcopy, VariantAnnotation
Maintained Yes

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Documentation


Maintainer


  • person_outline Markus Riester <>

Publication for PureCN

PureCN institution(s)
Novartis Institutes for BioMedical Research, Cambridge, MA, USA
PureCN funding source(s)
This work was supported by Novartis Institutes for BioMedical Research.

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