PUTMEDID-LCMS pipeline

PUTMEDID-LCMS specifications

Information


Unique identifier OMICS_06043
Name PUTMEDID-LCMS
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for PUTMEDID-LCMS

PUTMEDID-LCMS IN pipeline

2017
PMCID: 5665457
PMID: 28798136
DOI: 10.1242/dmm.030411

[…] features with an rsd >20% or with greater than 30% missing values for qc samples being removed from the dataset prior to data analysis. metabolite annotation was performed by applying the putmedid_lcms workflow as previously described (brown et al., 2011). all metabolite annotations are reported at level 2 according to msi reporting standards (sumner et al., 2007). the processed data […]

PUTMEDID-LCMS institution(s)
School of Biomedicine, The University of Manchester, Manchester, UK

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