pyAmpli specifications

Information


Unique identifier OMICS_25234
Interface Command line interface
Restrictions to use None
Input data An amplicon-design file, a paired tumor-normal variant calling file, and a normal and tumor alignment file.
Input format BAM+VCF
Output format VCF
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements https://github.com/MBeyens/pyAmpli/archive/master.zip
Maintained Yes

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Maintainer


  • person_outline Matthias Beyens <>

pyAmpli article

pyAmpli institution(s)
Center of Medical Genetics, University of Antwerp, Antwerp, Belgium; Center of Oncological Research, University of Antwerp, Antwerp, Belgium
pyAmpli funding source(s)
Supported by the Research Foundation Flanders (FWO, grant no. 12D1717N).

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