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pyClusterROI specifications

Information


Unique identifier OMICS_15692
Name pyClusterROI
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements
NiBabel, NumPy, SciPy
Maintained Yes

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Documentation


Maintainer


  • person_outline Cameron Craddock

Publication for pyClusterROI

pyClusterROI citation

library_books

ATPP: A Pipeline for Automatic Tractography Based Brain Parcellation

2017
Front Neuroinform
PMCID: 5447055
PMID: 28611620
DOI: 10.3389/fninf.2017.00035

[…] mponents to some extent.In recent years, a large number of studies related to connectivity-based parcellation were published, while there is still short of public parcellation tools in the community. pyClusterROI (Craddock et al., ) and SLIC (Wang and Wang, ) are tools dedicated to parcellating regions using resting-state functional MRI data, however, ATPP focuses on parcellation using diffusion M […]


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pyClusterROI funding source(s)
This work was supported by P50 MH077083 (HSM), R01 MH073719 (HSM), NIH R01 EB002009 (XPH), K23 MH077869 (PEH), and a NARSAD Young Investigator Award (PEH).

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