PyFDAP specifications
Information
| Unique identifier | OMICS_06663 |
|---|---|
| Name | PyFDAP |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | Python |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | Yes |
Versioning
No version available
Maintainer
- person_outline Alexander Bläßle
Publication for PyFDAP
library_books
PyFDAP: automated analysis of fluorescence decay after photoconversion (FDAP) experiments.
2015 Bioinformatics
PMID: 25380959
PyFDAP citation
library_books
Dynamics of BMP signaling and distribution during zebrafish dorsal ventral patterning
2017
eLife
PMCID: 5658070
PMID: 28857744
DOI: 10.7554/eLife.25861.025
[…] ed were excluded from analysis. Sample numbers: n = 22 for BMP2b-Dendra2 (with n = 17 background embryos); n = 6 for Chordin-Dendra2 (with n = 1 background embryo).All experiments were analyzed using PyFDAP (; ), version 1.1.2. PyFDAP extracts the extracellular and intracellular photoconverted Dendra2 signal by masking the Alexa 488 signal, and fits the resulting average intensities with a linear […]
PyFDAP institution(s)
Systems Biology of Development Group, Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany
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