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pyGeno specifications

Information


Unique identifier OMICS_08081
Name pyGeno
Interface Web user interface
Restrictions to use None
Programming languages Python
License Apache License version 2.0
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Maintainer


  • person_outline tariq.daouda

Additional information


http://pygeno.iric.ca/

Publications for pyGeno

pyGeno citation

library_books

Global proteogenomic analysis of human MHC class I associated peptides derived from non canonical reading frames

2016
Nat Commun
PMCID: 4728431
PMID: 26728094
DOI: 10.1038/ncomms10238

[…] databases referred to as the ‘control' and the ‘all-frames' databases (). both databases were built by in silico translation of rna-sequencing (rna-seq) data from subject 1's b-lcl using the pygeno python package (https://github.com/tariqdaouda/pygeno). two reasons led us to focus on the transcriptome rather than the genome of our b-lcl for database construction: (i) maps can only derive […]


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pyGeno institution(s)
IRIC | Institute for Research in Immunology and Cancer, Montréal, Canada

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