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OMIC
00069

PyroHMMvar

A program to call short indels and SNPs for Ion Torrent and 454 data.

Specifications

Software type:
Package
Interface:
Command line interface
Restrictions to use:
None
Biological technology:
Life Technologies, Roche
Operating system:
Unix/Linux
Programming languages:
C++
Computer skills:
Advanced
Stability:
Stable
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Publications

  • (Zeng et al., 2013) PyroHMMvar: a sensitive and accurate method to call short indels and SNPs for Ion Torrent and 454 data. Bioinformatics.
    PMID: 23995392

Classification

Literature

  • (Neuman et al., 2013) Analysis of insertion-deletion from deep-sequencing data: software evaluation for optimal detection. Briefings in bioinformatics.
    PMID: 22707752

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