- Unique identifier:
- Alternative name:
- Command line interface
- Operating system:
- Unix/Linux, Mac OS
- GNU General Public License version 3.0
- Numpy, zlib, C compiler, Matploblib, Cython, mpi4py, SQLAlchemy
- PYthon Comparative GENomic Toolkit
- Software type:
- Restrictions to use:
- Programming languages:
- Computer skills:
- Documentation: http://pycogent.org/README.html
- Rob Knight <>
No open topic.
(Knight et al., 2007)
PyCogent: a toolkit for making sense from sequence.
PMID: 17708774 DOI: 10.1186/gb-2007-8-8-r171
Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO, USA; Computational Genomics Laboratory, John Curtin School of Medical Research, The Australian National University, Canberra, Australia; Thermo Fisher Scientific, Lafayette, CO, USA; Seattle Biomedical Research Institute, Seattle, WA, USA; Department of Biochemistry and Molecular Genetics, University of Colorado Health Sciences Center, Aurora, CO, USA; Science Applications International Corporation, Englewood, CO, USA; Department of Computer Science, University of Colorado, Boulder, CO, USA; Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA; Walter and Eliza Hall Institute, Melbourne, Australia
This tool was funded by the Australian Partnership for Advanced Computing, Cray Australia Pty. Ltd., the Australian Research Council, the National Health and Medical Research Council, the Keck RNA Bioinformatics Initiative, Jane and Charlie Butcher Foundation, NIH Signaling and Cellular Regulation Training Grant, NIH Biophysics Training Grant, the National Academy Keck Futures Initiative
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