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QCluster specifications

Information


Unique identifier OMICS_07710
Name QCluster
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Matteo Comin <>

Publication for QCluster

QCluster citation

library_books

Molecular characterization of circulating colorectal tumor cells defines genetic signatures for individualized cancer care

2017
PMCID: 5620233
PMID: 28978093
DOI: 10.18632/oncotarget.19138

[…] primer length was set to 21 (average primer length of our generead panel); reads with mapping quality score less than 30 were excluded from the analysis and we grouped the reads into regions as qcluster. we plot the mutation spectrum chart by computing the frequency of various nucleotide changes in the detected snvs., we performed msi analysis on the tumor dna materials using msi analysis […]


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QCluster institution(s)
Department of Information Engineering, University of Padova, Padova, Italy

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