qDNAmod statistics

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Citations per year

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Associated diseases

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qDNAmod specifications

Information


Unique identifier OMICS_07473
Name qDNAmod
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Requirements
R
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Zhixing Feng <>

Publications for qDNAmod

qDNAmod in publications

 (2)
PMCID: 4948785
PMID: 27427949
DOI: 10.1371/journal.ppat.1005762

[…] heterogeneity in methylation patterns of the dna motifs recognized by the spn556ii type-i r-m system, as reflected by the median methylation proportion (mmp) values. mmp was estimated by a qdnamod bioinformatic tool [], which is available at https://github.com/zhixingfeng/qdnamod/releases. approximately 50% of the 1,026 loci of the methylation motif (5’-craan8ctt-3’) in the sequenced […]

PMCID: 4678779
PMID: 26542840
DOI: 10.1016/j.gpb.2015.08.002

[…] in a population, is a major cause of phenotypic heterogeneity in many organisms . in order to quantitatively detect intercellular heterogeneity in genome dna modifications, feng et al. developed qdnamod, a bioinformatics tool for analysis of pacbio sequencing data . applying qdnamod to streptococcus pneumoniae strain st556, feng et al. determined that four highly-significant methylation […]


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