Allows execution and comparison of a variety of modern QTL-mapping methods and supports third-party addition of new ones. QGene accommodates line-cross mating designs consisting of any arbitrary sequence of selfing, backcrossing, intercrossing and haploid-doubling steps that includes map, population, and trait simulators; and is scriptable.

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QGene classification

QGene specifications

Software type:
Toolkit
Restrictions to use:
None
Operating system:
Unix/Linux
Computer skills:
Medium
Stability:
Stable
Interface:
Graphical user interface
Input format:
.qdf
Programming languages:
Java
Version:
4.3.10

Publications

QGene support

Documentation

Maintainer

Credits

Institution(s)

Department of Plant Pathology, Kansas State University, Manhattan, KS, USA

Funding source(s)

Support has been provided by National Science Foundation NSF-DBI grant 0109879 and USDA-NRI Applied Plant Genomics Program grant 2004-35317-14867 entitled ‘RiceCAP: A coordinated research, education, and extension project for the application of genomic discoveries to improve rice in the United States’. This is contribution 09-111-J from the Kansas Agriculture Experiment Station.

Link to literature

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