QGene pipeline

QGene specifications


Unique identifier OMICS_12660
Name QGene
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Input format .qdf
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Version 4.3.10
Stability Stable
Maintained Yes


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  • person_outline QGene Team <>

Publications for QGene

QGene IN pipeline

PMCID: 4602206
PMID: 26458744
DOI: 10.1038/srep14799

[…] as a random variable., multiple trait−multiple interval mapping (mt-mim) analysis in the n22/ir64 and n22/swarna ril population was carried out as described by21. the analysis was performed with qgene software version 4.3.10 with 1000 permutations at significance level p < 0.0152. combined mean phenotypic data of two years were used for the analysis. the model used for mt-mim was, , […]

QGene institution(s)
Department of Plant Pathology, Kansas State University, Manhattan, KS, USA
QGene funding source(s)
Support has been provided by National Science Foundation NSF-DBI grant 0109879 and USDA-NRI Applied Plant Genomics Program grant 2004-35317-14867 entitled ‘RiceCAP: A coordinated research, education, and extension project for the application of genomic discoveries to improve rice in the United States’. This is contribution 09-111-J from the Kansas Agriculture Experiment Station.

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