Qisampler specifications


Unique identifier OMICS_22003
Name Qisampler
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A table with at least three pieces of information for each experimental result.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Stability Beta
Maintained Yes


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  • person_outline Jean F. Fontaine <>

Publication for Qisampler

Qisampler in publication

PMCID: 3561971
PMID: 23275563
DOI: 10.1093/nar/gks1329

[…] as positive when the calculated r-op and r-ob ratios were >1.25 and >2, respectively., quantitative scoring of the microarray data for known positive sets (literature) was performed using the qisampler application (). literature interactions for binary classification in the qisampler procedure were derived from the v1.2 release of the human integrated protein–protein interaction reference […]

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Qisampler institution(s)
Max Delbrück Center for Molecular Medicine, Berlin, Germany
Qisampler funding source(s)
Supported by the Medical Genome Research Programme NGFN-Plus by the German Ministry of Education and Research (BMBF) [01GS08170], and the Helmholtz Alliance in Systems Biology (Germany).

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